Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913018.1_cds_XP_016463106.1_56255
CDS Infomation

[gene=LOC107786168] [db_xref=GeneID:107786168] [protein=receptor-like serine/threonine-protein kinase SD1-8] [protein_id=XP_016463106.1] [location=join(10034..11348,14987..15145,15228..15418,15510..15720,15820..16057,16140..16290,16372..16683)] [gbkey=CDS]
Sequence

ATGAGAAACATTAACACCAAAGAATACTACTCCTACTACTTTCACCAATTTTCGCTCTTC
CTTTTGATTTCTCAATTTTTTGTTCCAATTCTTGCCATACCCACTGATACAATCACCCCA
ACACAGCCTTTAACCAAAGACCAAACCTTAGTATCTTCCGGACAACTCTTTGAATTAGGC
TTTTTCAATCCAGGCGGTGTCAATTCAGACAAATGGTATGTCGGAATTTGGTACAAAGAA
CCACAAGACAGGACTTTTGTCTGGGTTGCAAACAGAGACAACCCTCTCTCAAACTCACCT
ACCTCTGTCCTAAAACTCACCGAAAATGGCACCCTTCTTCTCATCGACGGTCAAACTAGG
AACTCCGTCTGGTCTTCCGATCAAACTCCGGCAAACAACGCAGTAGCTCAACTCCTAGAC
TCCGGGAACCTTGTCGTTCGACCAGAAAACGATGAAACAGAACAGAATTACACGTGGCAG
AGCTTTGATTATCCAACGGACACTTTATTACCTGGGATGAAACTTGGGTGGGACTCAAAA
AGTGGGTTAAACAGAAACATAACATCATGGAAAACAGCAACTGATCCAGCTCCTGGAGAT
TTCACTTTCAAGATCAACACAAATGGATTACCAGAAGTTTTCTTAACAAATAAACAAGAA
ATTGTCTACAGGAGTGGTGCTTGGAATGGACTTAGATTCAGTGGGGTACCGGAAATGAAA
CCTACTGAGATTATTTCATTCGAATTTCAGTTCACATCAGATGAAATATATTACATGTTT
GAGTTACATAACAAGACATTGTATTCTAGGTTGGTGGTGAATCATAACGTGCTTGAAAGA
TACATGTGGATTCCGACAAACAGTATATGGAATAGATTTTGGTATGCTCCGAAAGATCAA
TGTGATGGTTATACAGAGTGTGGGATGTCTGGAATTTGCGATACAAATCTTTCGCCGGTT
TGTAAATGTATGGTAGGATTTAAGCCTAAGAATCAAGTGGCATGGGATTTGAGAGATGGG
TCTGATGGATGTGTGAGATTTCATAAATTGGATTGTGAAACTGATAGTTTTAATATATTG
AGGAACATGAAATTGCCGGATACAACGAGCTCTTTTGTGGATAAAAACATGAATTTGGAT
GAATGTGAAGCTATGTGTCGGAAAAATTGTTCTTGCACGGCGTATACTAACTCAAATATT
AGTGGAAGCGGGTCGGGTTGTGTGATTTGGAGCACCGAACTTATTGACATGCGGCAGTAT
GCGGCGGCGGAAGGTGGCCAAGTTCTCTACGTTAGGGTGGCTTCTTCTGACGCAGCTGAA
AGTGGAGGTGTGGGATCAAGCAAGACAAAGAGAGTTGTAATAGCTGCTGGGATTACAGTT
GGTATAGCTATTGTGCTATTCGGAGTAATACTCTACTTCTTATCAAAGAGAAGAAAATAT
CAAGGTTCAATACGAACTAAGTCTGAAAACAAAGGCATTAGTGAAAGAAGTCAAGAACTT
CTAGTGAATGCAGCTATCATTCCAAGTAAAAGAGAGTTTTCTGGCGAAACAGCAACGGAA
GAGTTTGAATTGCCATTATTTGATTTCAGCACCCTAGCTATGGCTACAGAAAATTTCTCC
CATGCAACTAAGTTAGGCCAAGGTGGTTTTGGTTGTGTTTATAAGGGAATTCTGGTTGAA
GGTCAAGAAATAGCAGTTAAAAGGCTCTCAAAGAATTCGGGCCAAGGAGTAGAGGAATTT
AAGAATGAGCTAAGATTGATTGCTAGGCTACAGCACAGGAATCTGGTCCGGCTTCTTGGC
TGTTGTGTTGATATGGAAGAAAAGATGCTGATCTATGAATACCTGGAAAATAAAAGTTTA
GATTCAATTTTGTTCAATAAACAGAAATGCCTACTGCTGGACTGGCAAATGCGGTTCAAT
ATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCACCAAGATTCAAGATTTAGGATT
ATCCATAGAGACCTTAAAGCAAGCAATATTCTCCTAGATAAGGATTTGACCCCCAAAATA
TCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACAAAGAGA
GTAGTTGGAACCTATGGTTACATGTCTCCAGAATATGCGATGGATGGCCTCTTCTCTGTT
AAATCTGATGTTTTCAGCTTTGGGGTTTTGGTGCTAGAAATAGTTACCGGGAAGAAGAAT
AGAGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGCGTGGAAACTATGG
AAAGAAGGGAGAGGATCAGAGCTACTGGATCCATCTGTTGGAGAAACGTTTTCTCCGTGT
GAAGTAATGAGATGCATACAAGTTGGACTGTTGTGTGTCCAGGAGCAAGCAGAAGATAGA
CCAAAAATGGCTACTGTGGTTTTGATGTTAGGCAGCGAAAGCGCATCACTTCCTCAGCCT
AAAACCCCAGGATTTTGCCTTGGCAGAAGACCGGTTGATTCTGATTCACATTCAACTAAT
TATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATGGCCGATAG

Peptide Sequence

PEP ID

XP_016463106.1
PEP Infomation

PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 [Nicotiana tabacum]
Sequence

MRNINTKEYYSYYFHQFSLFLLISQFFVPILAIPTDTITPTQPLTKDQTLVSSGQLFELG
FFNPGGVNSDKWYVGIWYKEPQDRTFVWVANRDNPLSNSPTSVLKLTENGTLLLIDGQTR
NSVWSSDQTPANNAVAQLLDSGNLVVRPENDETEQNYTWQSFDYPTDTLLPGMKLGWDSK
SGLNRNITSWKTATDPAPGDFTFKINTNGLPEVFLTNKQEIVYRSGAWNGLRFSGVPEMK
PTEIISFEFQFTSDEIYYMFELHNKTLYSRLVVNHNVLERYMWIPTNSIWNRFWYAPKDQ
CDGYTECGMSGICDTNLSPVCKCMVGFKPKNQVAWDLRDGSDGCVRFHKLDCETDSFNIL
RNMKLPDTTSSFVDKNMNLDECEAMCRKNCSCTAYTNSNISGSGSGCVIWSTELIDMRQY
AAAEGGQVLYVRVASSDAAESGGVGSSKTKRVVIAAGITVGIAIVLFGVILYFLSKRRKY
QGSIRTKSENKGISERSQELLVNAAIIPSKREFSGETATEEFELPLFDFSTLAMATENFS
HATKLGQGGFGCVYKGILVEGQEIAVKRLSKNSGQGVEEFKNELRLIARLQHRNLVRLLG
CCVDMEEKMLIYEYLENKSLDSILFNKQKCLLLDWQMRFNIICGIARGLLYLHQDSRFRI
IHRDLKASNILLDKDLTPKISDFGMARIFGGDETEGNTKRVVGTYGYMSPEYAMDGLFSV
KSDVFSFGVLVLEIVTGKKNRGFYYQNNQLNLLGHAWKLWKEGRGSELLDPSVGETFSPC
EVMRCIQVGLLCVQEQAEDRPKMATVVLMLGSESASLPQPKTPGFCLGRRPVDSDSHSTN
YEETCTVNQVTVTMIDGR

Transcript Sequence

Gene sequence data has not been registered.